Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 TMBIM7P-202ENST00000641474 1516 ntBASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL4A3BPQ9Y5P4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 RBM8B-201ENST00000555532 525 ntBASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 RN7SL774P-201ENST00000577467 290 ntBASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 AC064801.2-201ENST00000625052 1303 ntBASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL4A3BPQ9Y5P4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AC020910.6-201ENST00000623084 1459 ntBASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 RN7SL11P-201ENST00000471305 293 ntBASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 RCC2P8-201ENST00000502779 1035 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms