Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 DPM3-202ENST00000368399 517 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 USP17L6P-201ENST00000382470 1197 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 XBP1P1-201ENST00000436573 652 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AC022217.1-201ENST00000521069 738 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 PGAM1P5-201ENST00000548011 764 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AC140658.4-201ENST00000561990 352 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AL022328.3-201ENST00000607943 679 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AC090164.2-201ENST00000611487 516 ntBASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HDGFL3Q9Y3E1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 AC136759.1-202ENST00000530858 2194 ntBASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 KRT18P36-201ENST00000411618 1276 ntBASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 AC018735.1-201ENST00000437208 1502 ntBASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HDGFL3Q9Y3E1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDGFL3Q9Y3E1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms