Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 KRT18P32-201ENST00000424695 1287 ntBASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AC243562.1-201ENST00000560672 389 ntBASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 AC124319.4-201ENST00000622931 2161 ntBASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 STRCP1-201ENST00000509801 5328 ntBASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRCH1Q9Y2L9 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AC105233.2-201ENST00000523697 349 ntBASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AF228730.5-201ENST00000530288 346 ntBASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AC092364.2-202ENST00000597012 1073 ntBASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms