Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SATB2Q9UPW6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SHC1P1-201ENST00000425230 1745 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AP000845.1-201ENST00000581677 2131 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 RN7SKP214-201ENST00000364208 315 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 RPL18P13-201ENST00000478088 569 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AC116345.2-201ENST00000512837 523 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 RTN3P1-201ENST00000536295 711 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AL160314.3-201ENST00000556041 767 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AC103988.2-201ENST00000561804 725 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AP003419.4-201ENST00000616071 517 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 NAP1L6-202ENST00000641404 1222 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 E2F3P2-201ENST00000447755 1422 ntBASIC14.29□□□□□ -0.12
SATB2Q9UPW6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SATB2Q9UPW6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 ISCA2P1-201ENST00000425548 448 ntBASIC14.28□□□□□ -0.12
SATB2Q9UPW6 PDIA3P2-201ENST00000428073 158 ntBASIC14.28□□□□□ -0.12
SATB2Q9UPW6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.28□□□□□ -0.12
SATB2Q9UPW6 FGFR3P1-201ENST00000449999 601 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms