Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.26■□□□□ 0.35
ZC3H4Q9UPT8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC053503.3-201ENST00000448375 114 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC078814.4-201ENST00000546650 327 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 KLF17P1-201ENST00000547105 1126 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC120498.7-201ENST00000562876 330 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AL021707.6-201ENST00000609212 491 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 GGNBP1-204ENST00000613113 887 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 AL357143.1-203ENST00000639750 881 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 CICP13-201ENST00000422015 2789 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 KHSRPP1-201ENST00000427983 1768 ntBASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.25■□□□□ 0.35
ZC3H4Q9UPT8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 MIR611-201ENST00000384869 67 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 MED15P3-201ENST00000413613 326 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 EEF1GP8-201ENST00000506566 1154 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 AL132994.1-201ENST00000554098 400 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 AL365181.1-201ENST00000564032 1828 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 LAP3P2-201ENST00000454686 1454 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 SSR4P1-203ENST00000599569 2260 ntBASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.24■□□□□ 0.35
ZC3H4Q9UPT8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZC3H4Q9UPT8 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms