Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC152010.1-201ENST00000415779 2006 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC244394.1-201ENST00000435000 1665 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 BRWD1P1-201ENST00000401091 371 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ACTBP11-201ENST00000436287 1126 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 PFN1P12-201ENST00000455938 534 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 TUBB8P8-201ENST00000458717 1058 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 FAM8A2P-201ENST00000528813 1142 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC100827.2-201ENST00000563214 1194 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 MIR6720-201ENST00000611664 98 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC091271.1-201ENST00000611877 1162 ntBASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPARGC1AQ9UBK2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 C8orf49-201ENST00000525043 1968 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AL157407.1-201ENST00000435784 904 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC012441.2-201ENST00000444843 739 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC104982.3-201ENST00000581995 514 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AC015802.1-201ENST00000588104 1449 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 AL023803.2-201ENST00000620080 638 ntBASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPARGC1AQ9UBK2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms