Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC099791.1-201ENST00000416440 715 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TERF1P2-201ENST00000583350 1212 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 UBE2DNL-204ENST00000602536 740 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LINC02084-201ENST00000606069 1096 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 MIR6074-201ENST00000612054 107 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC131212.4-201ENST00000623606 975 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC112497.1-201ENST00000624824 639 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC093525.6-201ENST00000563449 2001 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC091181.1-201ENST00000623762 2098 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AL691432.1-201ENST00000596308 1422 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ANKRD18CP-201ENST00000354752 2980 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 KBTBD4-209ENST00000533290 3079 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AL157414.3-201ENST00000624276 1954 ntBASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 PKD1L2-205ENST00000527937 4165 ntTSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 STK26-201ENST00000354719 3179 ntTSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 PCAT29-201ENST00000558411 2121 ntTSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CAPN9-203ENST00000366666 2173 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 UNC93B8-201ENST00000511903 705 ntBASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms