Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 SMC4P1-201ENST00000414479 527 ntBASIC17.37■□□□□ 0.37
RTN4Q9NQC3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 EEF1DP4-201ENST00000446006 880 ntBASIC17.37■□□□□ 0.37
RTN4Q9NQC3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 PHKG1P2-201ENST00000457537 863 ntBASIC17.37■□□□□ 0.37
RTN4Q9NQC3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.37■□□□□ 0.37
RTN4Q9NQC3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 KRT8P37-201ENST00000451609 1420 ntBASIC17.37■□□□□ 0.37
RTN4Q9NQC3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTN4Q9NQC3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AC018442.1-201ENST00000421439 2061 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TFAMP1-201ENST00000412727 736 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 RNA5SP410-201ENST00000516285 106 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AL135744.1-201ENST00000565098 629 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AC097359.3-201ENST00000603982 1210 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 SLC39A12-AS1-201ENST00000439319 1966 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AC005014.1-201ENST00000432006 2976 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 AC012617.1-204ENST00000586340 2305 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 CYP4F24P-201ENST00000586049 1580 ntBASIC17.36■□□□□ 0.37
RTN4Q9NQC3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4Q9NQC3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms