Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 AL031719.1-201ENST00000623365 2587 ntBASIC16.18■□□□□ 0.18
CBX8Q9HC52 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 ACKR1-201ENST00000368121 1240 ntBASIC16.18■□□□□ 0.18
CBX8Q9HC52 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.18■□□□□ 0.18
CBX8Q9HC52 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 KRT18P25-201ENST00000508931 1278 ntBASIC16.18■□□□□ 0.18
CBX8Q9HC52 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 SLC7A15P-201ENST00000424028 1363 ntBASIC16.17■□□□□ 0.18
CBX8Q9HC52 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC055876.3-201ENST00000431496 288 ntBASIC16.17■□□□□ 0.18
CBX8Q9HC52 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC138649.4-201ENST00000612222 287 ntBASIC16.17■□□□□ 0.18
CBX8Q9HC52 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC004899.2-201ENST00000622993 3860 ntBASIC16.17■□□□□ 0.18
CBX8Q9HC52 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC16.17■□□□□ 0.18
CBX8Q9HC52 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CBX8Q9HC52 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CBX8Q9HC52 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.16■□□□□ 0.18
CBX8Q9HC52 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CBX8Q9HC52 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CBX8Q9HC52 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CBX8Q9HC52 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms