Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AC103592.1-201ENST00000394513 664 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AC073210.1-201ENST00000414799 232 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 ASS1P2-201ENST00000439895 1223 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AC022447.6-201ENST00000515522 438 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 RN7SKP155-201ENST00000516031 288 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AL512310.5-201ENST00000551999 515 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RTFDC1Q9BY42 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC138761.6-201ENST00000583997 1423 ntBASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 PTGER4P2-201ENST00000328411 252 ntBASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 PTGER4P3-201ENST00000458150 252 ntBASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 AC027139.1-201ENST00000565286 951 ntBASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.25■□□□□ 0.35
RTFDC1Q9BY42 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 AC023824.1-201ENST00000562945 2975 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 KRT18P4-201ENST00000422599 1288 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 RN7SL556P-201ENST00000582856 298 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 AL160191.2-201ENST00000603975 601 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 AL136982.5-201ENST00000605222 294 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms