Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 RN7SKP175-201ENST00000408472 289 ntBASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC009486.1-201ENST00000569860 813 ntBASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AC064801.2-201ENST00000625052 1303 ntBASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 AL928654.5-201ENST00000624831 2501 ntBASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PEG13-201ENST00000631594 5667 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC004241.5-201ENST00000623870 2448 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 MIR661-201ENST00000384842 89 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 AL138709.1-201ENST00000614840 1693 ntBASIC12.26□□□□□ -0.45
HDHD3Q9BSH5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms