Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC024267.5-201ENST00000579154 599 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC022079.1-201ENST00000621546 602 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 AP002371.2-201ENST00000624450 503 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MYO15B-237ENST00000642007 4893 ntBASIC13.19□□□□□ -0.3
USB1Q9BQ65 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.19□□□□□ -0.3
USB1Q9BQ65 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USB1Q9BQ65 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 BEND3P1-201ENST00000421591 1944 ntBASIC13.18□□□□□ -0.3
USB1Q9BQ65 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 FAM86MP-201ENST00000340703 885 ntBASIC13.18□□□□□ -0.3
USB1Q9BQ65 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC126365.2-201ENST00000580630 379 ntBASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC008825.2-201ENST00000603374 718 ntBASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC091271.1-201ENST00000611877 1162 ntBASIC13.18□□□□□ -0.3
USB1Q9BQ65 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.18□□□□□ -0.3
USB1Q9BQ65 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USB1Q9BQ65 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms