Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 MIR6074-201ENST00000612054 107 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 AC139713.2-207ENST00000641556 1292 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 WASH7P-201ENST00000488147 1351 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.17□□□□□ -0.14
CLDN23Q96B33 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AC027612.2-202ENST00000445955 1199 ntBASIC14.17□□□□□ -0.14
CLDN23Q96B33 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AC078814.4-201ENST00000546650 327 ntBASIC14.17□□□□□ -0.14
CLDN23Q96B33 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.17□□□□□ -0.14
CLDN23Q96B33 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN23Q96B33 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN23Q96B33 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 CDCA4P4-201ENST00000435216 680 ntBASIC14.16□□□□□ -0.14
CLDN23Q96B33 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 AC025594.1-201ENST00000469533 543 ntBASIC14.16□□□□□ -0.14
CLDN23Q96B33 MIR2278-201ENST00000516344 96 ntBASIC14.16□□□□□ -0.14
CLDN23Q96B33 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 AC126755.5-201ENST00000622756 267 ntBASIC14.16□□□□□ -0.14
CLDN23Q96B33 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN23Q96B33 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN23Q96B33 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms