Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC099336.1-201ENST00000417053 1171 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 YBX1P6-201ENST00000442962 1002 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 HILS1-202ENST00000545329 423 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC100827.2-201ENST00000563214 1194 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 MIR4741-201ENST00000579822 90 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 MIR4783-201ENST00000580343 82 ntBASIC13.57□□□□□ -0.24
NUP43Q8NFH3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.57□□□□□ -0.24
NUP43Q8NFH3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AP005482.1-201ENST00000563722 1273 ntBASIC13.56□□□□□ -0.24
NUP43Q8NFH3 DUX4L45-201ENST00000566406 1057 ntBASIC13.56□□□□□ -0.24
NUP43Q8NFH3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AC133552.6-201ENST00000613406 534 ntBASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NUP43Q8NFH3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms