Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 BEND3P3-201ENST00000611030 2440 ntBASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRIML2Q8N7C3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 FAM90A12P-201ENST00000519497 2375 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 FAM90A24P-201ENST00000520792 2369 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AL391825.1-201ENST00000457671 1364 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 KLF2P2-201ENST00000416807 1039 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 KRT18P25-201ENST00000508931 1278 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AC004790.1-201ENST00000612686 536 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AP005019.2-201ENST00000615104 511 ntBASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIML2Q8N7C3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIML2Q8N7C3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms