Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 HIST2H2BB-201ENST00000449108 381 ntBASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AC008825.2-201ENST00000603374 718 ntBASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AC107918.4-201ENST00000641966 3141 ntBASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 AC015909.5-201ENST00000624336 2266 ntBASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC83Q8IWF9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AP006547.1-201ENST00000563435 692 ntBASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC83Q8IWF9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC83Q8IWF9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AHCYP2-201ENST00000430630 1300 ntBASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 CNN2P10-201ENST00000443067 918 ntBASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AL355994.2-201ENST00000447882 704 ntBASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC83Q8IWF9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms