Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 AL161932.2-201ENST00000435436 679 ntBASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 VDAC1P1-201ENST00000439229 848 ntBASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 AC126915.1-201ENST00000522847 1038 ntBASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 COL6A4P2-202ENST00000504443 2753 ntBASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD3Q7Z3D4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC004898.1-201ENST00000451057 766 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC104073.2-201ENST00000453737 312 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SERPINA13P-202ENST00000478994 924 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AP001258.2-201ENST00000529891 490 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 GPR182-203ENST00000622922 591 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC004923.1-202ENST00000642106 209 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC152010.1-201ENST00000415779 2006 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AC064801.2-201ENST00000625052 1303 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 AL122018.1-201ENST00000446607 2310 ntBASIC14.57□□□□□ -0.08
LYSMD3Q7Z3D4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD3Q7Z3D4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms