Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SCXQ7RTU7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SCXQ7RTU7 AL354989.2-201ENST00000435838 1540 ntBASIC9.72□□□□□ -0.85
SCXQ7RTU7 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCXQ7RTU7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC9.71□□□□□ -0.85
SCXQ7RTU7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MIR326-201ENST00000362220 95 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 BCYRN1-201ENST00000418539 200 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 NUS1P3-201ENST00000423502 862 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC114812.1-204ENST00000449669 728 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC103810.3-201ENST00000583567 96 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC006453.4-201ENST00000636949 1252 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 ILF3-AS1-201ENST00000591501 1983 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 MROH4P-201ENST00000431302 1578 ntBASIC9.71□□□□□ -0.86
SCXQ7RTU7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCXQ7RTU7 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC9.71□□□□□ -0.86
SCXQ7RTU7 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms