Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 RPL31P11-201ENST00000426558 1558 ntBASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 CYP4F23P-201ENST00000593402 1579 ntBASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRDL2Q6WN34 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC007342.9-201ENST00000623877 1385 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC106827.1-201ENST00000366454 431 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AL365214.1-201ENST00000404237 997 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AL512306.1-201ENST00000432698 848 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC073648.4-201ENST00000442655 781 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 GNG10P1-201ENST00000452289 199 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 HIST1H2APS2-201ENST00000454426 370 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC104164.3-201ENST00000467363 1258 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 OR7E121P-201ENST00000494533 1022 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 UBTFL10-201ENST00000528532 562 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC068831.5-201ENST00000557387 328 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC080078.2-201ENST00000603766 501 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 AC133540.1-201ENST00000620845 1019 ntBASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRDL2Q6WN34 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AL512310.2-201ENST00000547175 1493 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 LINC02297-201ENST00000548050 1493 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AC117434.1-201ENST00000419971 836 ntBASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 SETD6P1-201ENST00000444575 317 ntBASIC16.05■□□□□ 0.16
CHRDL2Q6WN34 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms