Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 PCDHA6-201ENST00000378126 3267 ntBASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 ACTBP11-201ENST00000436287 1126 ntBASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AL359711.2-201ENST00000563105 872 ntBASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AL158212.4-201ENST00000624062 1286 ntBASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
FOXR1Q6PIV2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 FAM86LP-201ENST00000478302 853 ntBASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXR1Q6PIV2 AC007787.1-201ENST00000588095 1583 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms