Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 RNA5SP288-201ENST00000516075 93 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 FAM223B-202ENST00000598177 713 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC127002.1-201ENST00000619123 455 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC073869.4-201ENST00000620841 800 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 FAM223A-202ENST00000625204 713 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 IQCF4-203ENST00000428561 420 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 RN7SL487P-201ENST00000468140 344 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC023051.2-201ENST00000541141 460 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC097474.1-201ENST00000506481 1371 ntBASIC13.76□□□□□ -0.21
RIF1Q5UIP0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RIF1Q5UIP0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC000078.1-201ENST00000420617 682 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AL161727.1-201ENST00000457409 530 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 RN7SL684P-201ENST00000465665 294 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 FAM213AP2-201ENST00000521579 683 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 PHBP18-201ENST00000546648 813 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 AC024909.3-201ENST00000611513 2257 ntBASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RIF1Q5UIP0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms