Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC138907.10-201ENST00000623708 983 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC011491.1-203ENST00000637688 543 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AL592076.1-201ENST00000424448 303 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC093752.3-201ENST00000567343 901 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC012181.2-201ENST00000570210 699 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 SIGLEC18P-201ENST00000602271 909 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 RN7SL736P-201ENST00000613111 269 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC090386.2-201ENST00000623010 1039 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 AL805961.1-201ENST00000642026 753 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 PCDHA3-202ENST00000532566 4594 ntBASIC15.36■□□□□ 0.05
VARS2Q5ST30 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VARS2Q5ST30 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
VARS2Q5ST30 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 LAP3P2-201ENST00000454686 1454 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 KRT17P5-201ENST00000332088 839 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms