Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP7AQ04656 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATP7AQ04656 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP7AQ04656 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP7AQ04656 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP7AQ04656 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ATP7AQ04656 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP7AQ04656 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP7AQ04656 AC098657.1-201ENST00000416270 1135 ntBASIC20.7■□□□□ 0.9
ATP7AQ04656 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP7AQ04656 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP7AQ04656 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP7AQ04656 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 FGD5P1-202ENST00000614866 2498 ntBASIC20.7■□□□□ 0.9
ATP7AQ04656 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP7AQ04656 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP7AQ04656 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP7AQ04656 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP7AQ04656 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP7AQ04656 MIR611-201ENST00000384869 67 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PSME2P2-201ENST00000453033 700 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP7AQ04656 AC093700.1-201ENST00000503348 717 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PRR20FP-201ENST00000603320 180 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 CSTP2-201ENST00000610599 398 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 AC123912.6-201ENST00000612657 315 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP7AQ04656 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 AC023824.1-201ENST00000562945 2975 ntBASIC20.69■□□□□ 0.9
ATP7AQ04656 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
ATP7AQ04656 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP7AQ04656 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ATP7AQ04656 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP7AQ04656 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 OR7E155P-201ENST00000412208 1014 ntBASIC20.68■□□□□ 0.9
ATP7AQ04656 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP7AQ04656 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 MEP1AP1-201ENST00000636082 1097 ntBASIC20.68■□□□□ 0.9
ATP7AQ04656 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC089987.1-201ENST00000551654 2209 ntBASIC20.68■□□□□ 0.9
ATP7AQ04656 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ATP7AQ04656 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP7AQ04656 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP7AQ04656 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 ALG1L15P-201ENST00000482834 794 ntBASIC20.68■□□□□ 0.9
ATP7AQ04656 RPL29P2-201ENST00000488409 460 ntBASIC20.68■□□□□ 0.9
ATP7AQ04656 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP7AQ04656 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP7AQ04656 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP7AQ04656 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP7AQ04656 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms