Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
EFNB1P98172 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.9□□□□□ -0.34
EFNB1P98172 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.9□□□□□ -0.34
EFNB1P98172 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.9□□□□□ -0.34
EFNB1P98172 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
EFNB1P98172 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.9□□□□□ -0.34
EFNB1P98172 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.9□□□□□ -0.34
EFNB1P98172 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 LAP3P2-201ENST00000454686 1454 ntBASIC12.9□□□□□ -0.34
EFNB1P98172 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.9□□□□□ -0.34
EFNB1P98172 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
EFNB1P98172 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
EFNB1P98172 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.9□□□□□ -0.35
EFNB1P98172 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 SHMT1P1-201ENST00000419974 1312 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
EFNB1P98172 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 AC115284.2-201ENST00000624646 2054 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 AP003969.2-201ENST00000623739 2275 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 SNORA50C-201ENST00000408535 133 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 CD8B2-202ENST00000417670 633 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 FAM8A4P-201ENST00000435433 1213 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 RNA5SP486-201ENST00000515961 83 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 RNA5SP421-201ENST00000516864 134 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 AL512310.5-201ENST00000551999 515 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.89□□□□□ -0.35
EFNB1P98172 OR10B1P-201ENST00000601666 907 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 AC008494.3-201ENST00000606615 944 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 SNORA50.1-201ENST00000628590 135 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 AL031719.1-201ENST00000623365 2587 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 AC061965.1-201ENST00000560524 1465 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 PTENP1-202ENST00000532280 3996 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.89□□□□□ -0.35
EFNB1P98172 PCDHB18P-202ENST00000526308 3197 ntBASIC12.89□□□□□ -0.35
EFNB1P98172 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
EFNB1P98172 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.89□□□□□ -0.35
EFNB1P98172 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
EFNB1P98172 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.88□□□□□ -0.35
EFNB1P98172 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
EFNB1P98172 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
EFNB1P98172 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
EFNB1P98172 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms