Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAE1P78406 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 OR2R1P-201ENST00000441404 914 ntBASIC13.68□□□□□ -0.22
RAE1P78406 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.68□□□□□ -0.22
RAE1P78406 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.68□□□□□ -0.22
RAE1P78406 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 PGAM1P5-201ENST00000548011 764 ntBASIC13.68□□□□□ -0.22
RAE1P78406 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.68□□□□□ -0.22
RAE1P78406 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.68□□□□□ -0.22
RAE1P78406 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.68□□□□□ -0.22
RAE1P78406 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAE1P78406 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAE1P78406 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.68□□□□□ -0.22
RAE1P78406 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAE1P78406 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RAE1P78406 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 VDAC1P1-201ENST00000439229 848 ntBASIC13.67□□□□□ -0.22
RAE1P78406 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 GPR53P-205ENST00000457298 1084 ntBASIC13.67□□□□□ -0.22
RAE1P78406 KRT18P15-201ENST00000458108 1291 ntBASIC13.67□□□□□ -0.22
RAE1P78406 SCARNA21-201ENST00000517026 139 ntBASIC13.67□□□□□ -0.22
RAE1P78406 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.67□□□□□ -0.22
RAE1P78406 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 AP005482.1-201ENST00000563722 1273 ntBASIC13.67□□□□□ -0.22
RAE1P78406 AC005324.6-201ENST00000587972 613 ntBASIC13.67□□□□□ -0.22
RAE1P78406 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.67□□□□□ -0.22
RAE1P78406 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.67□□□□□ -0.22
RAE1P78406 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 CICP17-201ENST00000418553 2377 ntBASIC13.67□□□□□ -0.22
RAE1P78406 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.67□□□□□ -0.22
RAE1P78406 AC073548.1-201ENST00000624088 1882 ntBASIC13.67□□□□□ -0.22
RAE1P78406 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAE1P78406 NCLP1-201ENST00000445357 1963 ntBASIC13.67□□□□□ -0.22
RAE1P78406 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAE1P78406 AC007952.5-201ENST00000572818 1486 ntBASIC13.67□□□□□ -0.22
RAE1P78406 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAE1P78406 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms