Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CLDN20P56880 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 PFN1P12-201ENST00000455938 534 ntBASIC13.34□□□□□ -0.27
CLDN20P56880 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN20P56880 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN20P56880 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN20P56880 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN20P56880 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 BX088702.1-201ENST00000610784 235 ntBASIC13.34□□□□□ -0.27
CLDN20P56880 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDN20P56880 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.34□□□□□ -0.27
CLDN20P56880 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CLDN20P56880 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN20P56880 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN20P56880 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CLDN20P56880 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN20P56880 AL136172.1-201ENST00000598590 1394 ntBASIC13.33□□□□□ -0.27
CLDN20P56880 SHC1P1-201ENST00000425230 1745 ntBASIC13.33□□□□□ -0.27
CLDN20P56880 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDN20P56880 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CLDN20P56880 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN20P56880 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.33□□□□□ -0.28
CLDN20P56880 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN20P56880 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN20P56880 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN20P56880 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN20P56880 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN20P56880 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN20P56880 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 MIR6869-201ENST00000619434 62 ntBASIC13.33□□□□□ -0.28
CLDN20P56880 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN20P56880 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN20P56880 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CLDN20P56880 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN20P56880 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN20P56880 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN20P56880 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms