Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.24□□□□□ -0.13
LIMK1P53667 OR51A9P-201ENST00000422578 911 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 ERP29P1-201ENST00000442902 706 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIMK1P53667 AC083801.1-201ENST00000491689 358 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.24□□□□□ -0.13
LIMK1P53667 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.24□□□□□ -0.13
LIMK1P53667 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LIMK1P53667 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.24□□□□□ -0.13
LIMK1P53667 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIMK1P53667 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.24□□□□□ -0.13
LIMK1P53667 AC012073.1-201ENST00000606114 1108 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 AC021016.3-201ENST00000608367 477 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 AL627230.2-201ENST00000613254 655 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.24□□□□□ -0.13
LIMK1P53667 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.24□□□□□ -0.13
LIMK1P53667 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIMK1P53667 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIMK1P53667 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.24□□□□□ -0.13
LIMK1P53667 AC003102.2-201ENST00000589195 1469 ntBASIC14.24□□□□□ -0.13
LIMK1P53667 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LIMK1P53667 BEND3P1-201ENST00000421591 1944 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.23□□□□□ -0.13
LIMK1P53667 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LIMK1P53667 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.23□□□□□ -0.13
LIMK1P53667 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.23□□□□□ -0.13
LIMK1P53667 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 RN7SKP109-201ENST00000410592 316 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LIMK1P53667 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.23□□□□□ -0.13
LIMK1P53667 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.23□□□□□ -0.13
LIMK1P53667 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 AC018638.5-201ENST00000450885 754 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 RN7SL357P-201ENST00000581065 298 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 AP005264.6-204ENST00000588436 719 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.23□□□□□ -0.13
LIMK1P53667 AL022334.2-201ENST00000610000 484 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 PTPN20CP-201ENST00000614090 920 ntBASIC14.23□□□□□ -0.13
LIMK1P53667 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
LIMK1P53667 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LIMK1P53667 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.23□□□□□ -0.13
LIMK1P53667 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMK1P53667 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LIMK1P53667 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 MIR1301-201ENST00000408518 82 ntBASIC14.22□□□□□ -0.13
LIMK1P53667 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.22□□□□□ -0.13
LIMK1P53667 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.22□□□□□ -0.13
LIMK1P53667 PGAM1P12-201ENST00000505622 748 ntBASIC14.22□□□□□ -0.13
LIMK1P53667 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.22□□□□□ -0.13
LIMK1P53667 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.22□□□□□ -0.13
LIMK1P53667 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.22□□□□□ -0.13
LIMK1P53667 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMK1P53667 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMK1P53667 AC005252.3-201ENST00000623855 2258 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms