Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD4P46934 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 LINC02486-201ENST00000604157 3000 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD4P46934 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.93■□□□□ 0.3
NEDD4P46934 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NEDD4P46934 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NEDD4P46934 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 FRMPD2B-201ENST00000431305 1347 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NEDD4P46934 AL008707.1-201ENST00000422498 534 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.93■□□□□ 0.3
NEDD4P46934 NUP210P1-202ENST00000504322 710 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD4P46934 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.93■□□□□ 0.3
NEDD4P46934 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD4P46934 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.93■□□□□ 0.3
NEDD4P46934 AL021578.1-201ENST00000613646 709 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 AC138627.1-207ENST00000641560 1006 ntBASIC16.93■□□□□ 0.3
NEDD4P46934 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NEDD4P46934 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 AL157996.1-201ENST00000624684 2299 ntBASIC16.92■□□□□ 0.3
NEDD4P46934 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NEDD4P46934 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 BEND3P1-201ENST00000421591 1944 ntBASIC16.92■□□□□ 0.3
NEDD4P46934 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD4P46934 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NEDD4P46934 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 BCYRN1-201ENST00000418539 200 ntBASIC16.92■□□□□ 0.3
NEDD4P46934 AC012618.1-201ENST00000461223 412 ntBASIC16.92■□□□□ 0.3
NEDD4P46934 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.92■□□□□ 0.3
NEDD4P46934 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD4P46934 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 AC116345.2-201ENST00000512837 523 ntBASIC16.92■□□□□ 0.3
NEDD4P46934 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.92■□□□□ 0.3
NEDD4P46934 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.92■□□□□ 0.3
NEDD4P46934 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NEDD4P46934 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NEDD4P46934 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
NEDD4P46934 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NEDD4P46934 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 LINC01815-202ENST00000641468 1409 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms