Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGCLP35914 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCLP35914 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCLP35914 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCLP35914 AC138028.6-201ENST00000616106 1482 ntBASIC14.37□□□□□ -0.11
HMGCLP35914 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCLP35914 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HMGCLP35914 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGCLP35914 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGCLP35914 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCLP35914 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCLP35914 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 KRT8P24-201ENST00000560290 1559 ntBASIC14.36□□□□□ -0.11
HMGCLP35914 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCLP35914 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCLP35914 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCLP35914 BX284668.4-201ENST00000453917 508 ntBASIC14.36□□□□□ -0.11
HMGCLP35914 KRT18P15-201ENST00000458108 1291 ntBASIC14.36□□□□□ -0.11
HMGCLP35914 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
HMGCLP35914 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 AL512310.5-201ENST00000551999 515 ntBASIC14.36□□□□□ -0.11
HMGCLP35914 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCLP35914 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCLP35914 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HMGCLP35914 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 AC007952.5-201ENST00000572818 1486 ntBASIC14.36□□□□□ -0.11
HMGCLP35914 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HMGCLP35914 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCLP35914 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCLP35914 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HMGCLP35914 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HMGCLP35914 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HMGCLP35914 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 AL122018.1-201ENST00000446607 2310 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 TSPY25P-201ENST00000429463 745 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.35□□□□□ -0.11
HMGCLP35914 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.35□□□□□ -0.11
HMGCLP35914 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.35□□□□□ -0.11
HMGCLP35914 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.35□□□□□ -0.11
HMGCLP35914 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 MIR4525-201ENST00000580000 75 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCLP35914 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCLP35914 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCLP35914 AL805961.1-203ENST00000641078 1258 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HMGCLP35914 KRT8P21-201ENST00000430398 1491 ntBASIC14.35□□□□□ -0.11
HMGCLP35914 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCLP35914 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCLP35914 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms