Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 AL512599.1-201ENST00000430724 685 ntBASIC17.6■□□□□ 0.41
PDE6BP35913 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6BP35913 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6BP35913 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6BP35913 AC005777.1-201ENST00000588332 187 ntBASIC17.6■□□□□ 0.41
PDE6BP35913 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6BP35913 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6BP35913 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6BP35913 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6BP35913 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6BP35913 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 MYADML-201ENST00000474610 2147 ntBASIC17.59■□□□□ 0.41
PDE6BP35913 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 AC064801.2-201ENST00000625052 1303 ntBASIC17.59■□□□□ 0.41
PDE6BP35913 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDE6BP35913 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 AC025186.1-201ENST00000478174 870 ntBASIC17.59■□□□□ 0.41
PDE6BP35913 RN7SL288P-201ENST00000490496 291 ntBASIC17.59■□□□□ 0.41
PDE6BP35913 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.59■□□□□ 0.41
PDE6BP35913 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.59■□□□□ 0.41
PDE6BP35913 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6BP35913 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDE6BP35913 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6BP35913 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PDE6BP35913 AL365181.1-201ENST00000564032 1828 ntBASIC17.58■□□□□ 0.41
PDE6BP35913 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.58■□□□□ 0.41
PDE6BP35913 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.58■□□□□ 0.41
PDE6BP35913 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.58■□□□□ 0.41
PDE6BP35913 RPL13AP3-202ENST00000494676 1473 ntBASIC17.58■□□□□ 0.41
PDE6BP35913 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6BP35913 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PDE6BP35913 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6BP35913 FKBP4P8-201ENST00000610931 1369 ntBASIC17.58■□□□□ 0.4
PDE6BP35913 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6BP35913 ENPP7P8-202ENST00000527856 1345 ntBASIC17.58■□□□□ 0.4
PDE6BP35913 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6BP35913 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6BP35913 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6BP35913 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6BP35913 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.58■□□□□ 0.4
PDE6BP35913 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.58■□□□□ 0.4
PDE6BP35913 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.58■□□□□ 0.4
PDE6BP35913 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.58■□□□□ 0.4
PDE6BP35913 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.58■□□□□ 0.4
PDE6BP35913 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms