Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRNA3P32297 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 AL354989.2-201ENST00000435838 1540 ntBASIC15.32■□□□□ 0.04
CHRNA3P32297 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 FAM90A12P-201ENST00000519497 2375 ntBASIC15.32■□□□□ 0.04
CHRNA3P32297 FAM90A24P-201ENST00000520792 2369 ntBASIC15.32■□□□□ 0.04
CHRNA3P32297 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.32■□□□□ 0.04
CHRNA3P32297 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHRNA3P32297 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CHRNA3P32297 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 KHSRPP1-201ENST00000427983 1768 ntBASIC15.31■□□□□ 0.04
CHRNA3P32297 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 AC139712.1-201ENST00000378256 1875 ntBASIC15.31■□□□□ 0.04
CHRNA3P32297 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHRNA3P32297 AC004945.1-201ENST00000416738 983 ntBASIC15.31■□□□□ 0.04
CHRNA3P32297 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.31■□□□□ 0.04
CHRNA3P32297 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.31■□□□□ 0.04
CHRNA3P32297 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRNA3P32297 SORD2P-201ENST00000558556 1069 ntBASIC15.31■□□□□ 0.04
CHRNA3P32297 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 AP001002.3-201ENST00000623482 206 ntBASIC15.31■□□□□ 0.04
CHRNA3P32297 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CHRNA3P32297 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRNA3P32297 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRNA3P32297 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHRNA3P32297 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRNA3P32297 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRNA3P32297 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AC107918.4-201ENST00000641966 3141 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 RN7SKP230-201ENST00000365642 335 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHRNA3P32297 POM121L8P-201ENST00000417732 1281 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 ACTBP11-201ENST00000436287 1126 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRNA3P32297 POM121L9P-203ENST00000441984 1285 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.3■□□□□ 0.04
CHRNA3P32297 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRNA3P32297 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.3■□□□□ 0.04
CHRNA3P32297 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRNA3P32297 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CHRNA3P32297 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRNA3P32297 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms