Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ABCD3P28288 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ABCD3P28288 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCD3P28288 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC016700.1-201ENST00000429424 312 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 OR2R1P-201ENST00000441404 914 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC125604.1-201ENST00000496255 707 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 RCC2P8-201ENST00000502779 1035 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 SCARNA20.5-201ENST00000516991 142 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 AC022217.1-201ENST00000521069 738 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCD3P28288 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCD3P28288 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 MIR6787-201ENST00000616675 61 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 AC092299.1-201ENST00000632679 757 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC107918.4-201ENST00000641966 3141 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCD3P28288 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 HSPA8P5-201ENST00000456928 2069 ntBASIC13.35□□□□□ -0.27
ABCD3P28288 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 AC152010.1-201ENST00000415779 2006 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCD3P28288 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCD3P28288 AC011742.3-201ENST00000439053 820 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 BX284668.4-201ENST00000453917 508 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 AKR7A2P1-201ENST00000460134 915 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 AC026740.1-201ENST00000607068 791 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ABCD3P28288 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ABCD3P28288 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 LAP3P2-201ENST00000454686 1454 ntBASIC13.34□□□□□ -0.27
ABCD3P28288 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCD3P28288 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCD3P28288 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCD3P28288 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms