Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC100850.1-201ENST00000506768 649 ntBASIC12.17□□□□□ -0.46
LMO1P25800 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO1P25800 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO1P25800 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO1P25800 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 AC009955.4-201ENST00000597192 544 ntBASIC12.17□□□□□ -0.46
LMO1P25800 AL512343.1-201ENST00000605837 169 ntBASIC12.17□□□□□ -0.46
LMO1P25800 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LMO1P25800 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 AC126755.1-201ENST00000525846 6405 ntBASIC12.16□□□□□ -0.46
LMO1P25800 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.16□□□□□ -0.46
LMO1P25800 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 AC079178.1-201ENST00000420915 656 ntBASIC12.16□□□□□ -0.46
LMO1P25800 AC234783.1-201ENST00000441761 496 ntBASIC12.16□□□□□ -0.46
LMO1P25800 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.16□□□□□ -0.46
LMO1P25800 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.16□□□□□ -0.46
LMO1P25800 AP006547.1-201ENST00000563435 692 ntBASIC12.16□□□□□ -0.46
LMO1P25800 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 MIR6720-201ENST00000611664 98 ntBASIC12.16□□□□□ -0.46
LMO1P25800 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 AC244157.2-201ENST00000616239 1006 ntBASIC12.16□□□□□ -0.46
LMO1P25800 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LMO1P25800 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LMO1P25800 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
LMO1P25800 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 AC067750.1-201ENST00000608826 6545 ntBASIC12.16□□□□□ -0.46
LMO1P25800 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.16□□□□□ -0.46
LMO1P25800 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LMO1P25800 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LMO1P25800 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms