Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
KRT4P19013 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT4P19013 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
KRT4P19013 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 CLUHP2-201ENST00000426660 1303 ntBASIC14.59□□□□□ -0.07
KRT4P19013 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.59□□□□□ -0.07
KRT4P19013 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT4P19013 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
KRT4P19013 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT4P19013 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT4P19013 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
KRT4P19013 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
KRT4P19013 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KRT4P19013 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT4P19013 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.58□□□□□ -0.08
KRT4P19013 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.58□□□□□ -0.08
KRT4P19013 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.58□□□□□ -0.08
KRT4P19013 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 AC005252.2-201ENST00000624630 1141 ntBASIC14.58□□□□□ -0.08
KRT4P19013 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT4P19013 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KRT4P19013 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT4P19013 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT4P19013 BEND3P3-201ENST00000611030 2440 ntBASIC14.57□□□□□ -0.08
KRT4P19013 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT4P19013 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT4P19013 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT4P19013 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT4P19013 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT4P19013 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.57□□□□□ -0.08
KRT4P19013 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT4P19013 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT4P19013 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.57□□□□□ -0.08
KRT4P19013 AC055876.3-201ENST00000431496 288 ntBASIC14.57□□□□□ -0.08
KRT4P19013 GNAQP1-201ENST00000444815 1067 ntBASIC14.57□□□□□ -0.08
KRT4P19013 PUDPP3-201ENST00000445368 636 ntBASIC14.57□□□□□ -0.08
KRT4P19013 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT4P19013 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT4P19013 KRT18P25-201ENST00000508931 1278 ntBASIC14.57□□□□□ -0.08
KRT4P19013 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KRT4P19013 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.57□□□□□ -0.08
KRT4P19013 AC138649.4-201ENST00000612222 287 ntBASIC14.57□□□□□ -0.08
KRT4P19013 BAP1-211ENST00000615113 489 ntBASIC14.57□□□□□ -0.08
KRT4P19013 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT4P19013 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms