Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LBPP18428 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LBPP18428 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LBPP18428 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LBPP18428 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LBPP18428 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LBPP18428 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.02□□□□□ -0.16
LBPP18428 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.02□□□□□ -0.16
LBPP18428 AC068760.1-201ENST00000493579 1953 ntBASIC14.02□□□□□ -0.16
LBPP18428 MSTO2P-201ENST00000314835 1709 ntBASIC14.02□□□□□ -0.16
LBPP18428 AL138709.1-201ENST00000614840 1693 ntBASIC14.02□□□□□ -0.16
LBPP18428 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LBPP18428 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.02□□□□□ -0.16
LBPP18428 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LBPP18428 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LBPP18428 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LBPP18428 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.02□□□□□ -0.17
LBPP18428 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.02□□□□□ -0.17
LBPP18428 BAATP1-201ENST00000412284 1225 ntBASIC14.02□□□□□ -0.17
LBPP18428 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
LBPP18428 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LBPP18428 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 CICP20-201ENST00000443330 2801 ntBASIC14.02□□□□□ -0.17
LBPP18428 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LBPP18428 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
LBPP18428 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LBPP18428 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LBPP18428 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.02□□□□□ -0.17
LBPP18428 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LBPP18428 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.01□□□□□ -0.17
LBPP18428 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LBPP18428 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.01□□□□□ -0.17
LBPP18428 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.01□□□□□ -0.17
LBPP18428 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 TPM3P8-201ENST00000330554 643 ntBASIC14.01□□□□□ -0.17
LBPP18428 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.01□□□□□ -0.17
LBPP18428 API5-211ENST00000534695 560 ntTSL 5 BASIC14.01□□□□□ -0.17
LBPP18428 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.01□□□□□ -0.17
LBPP18428 AC106820.3-201ENST00000561653 397 ntBASIC14.01□□□□□ -0.17
LBPP18428 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LBPP18428 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.01□□□□□ -0.17
LBPP18428 KRT18P8-201ENST00000581937 1246 ntBASIC14.01□□□□□ -0.17
LBPP18428 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.01□□□□□ -0.17
LBPP18428 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.01□□□□□ -0.17
LBPP18428 AC008494.3-201ENST00000606615 944 ntBASIC14.01□□□□□ -0.17
LBPP18428 AL033527.5-201ENST00000641382 801 ntBASIC14.01□□□□□ -0.17
LBPP18428 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LBPP18428 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LBPP18428 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LBPP18428 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms