Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VCLP18206 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.65□□□□□ -0.06
VCLP18206 MTX1P1-201ENST00000440904 838 ntBASIC14.65□□□□□ -0.06
VCLP18206 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.65□□□□□ -0.06
VCLP18206 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.65□□□□□ -0.06
VCLP18206 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.65□□□□□ -0.06
VCLP18206 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.65□□□□□ -0.06
VCLP18206 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VCLP18206 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.65□□□□□ -0.06
VCLP18206 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.65□□□□□ -0.06
VCLP18206 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.65□□□□□ -0.06
VCLP18206 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VCLP18206 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.65□□□□□ -0.06
VCLP18206 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
VCLP18206 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
VCLP18206 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
VCLP18206 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
VCLP18206 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 RPL13AP20-201ENST00000459725 609 ntBASIC14.64□□□□□ -0.07
VCLP18206 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.64□□□□□ -0.07
VCLP18206 AC022447.6-201ENST00000515522 438 ntBASIC14.64□□□□□ -0.07
VCLP18206 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.64□□□□□ -0.07
VCLP18206 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.64□□□□□ -0.07
VCLP18206 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.64□□□□□ -0.07
VCLP18206 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.64□□□□□ -0.07
VCLP18206 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VCLP18206 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.64□□□□□ -0.07
VCLP18206 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 NUTM2HP-201ENST00000442076 2498 ntBASIC14.64□□□□□ -0.07
VCLP18206 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VCLP18206 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.64□□□□□ -0.07
VCLP18206 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 AL023775.1-201ENST00000454907 1746 ntBASIC14.63□□□□□ -0.07
VCLP18206 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
VCLP18206 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.63□□□□□ -0.07
VCLP18206 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms