Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RN7SL11P-201ENST00000471305 293 ntBASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 BNIP3P13-201ENST00000599968 566 ntBASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 AL358472.3-201ENST00000608147 415 ntBASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 SHC1P1-201ENST00000425230 1745 ntBASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCNYL3P0C7X3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC004899.1-201ENST00000424687 1714 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DUX4L46-201ENST00000566845 751 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 RN7SL190P-201ENST00000582519 257 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC008825.2-201ENST00000603374 718 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC138696.2-201ENST00000607376 223 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AC108359.1-201ENST00000616451 1211 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 AL359183.1-201ENST00000623796 2132 ntBASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.11□□□□□ -0.15
CCNYL3P0C7X3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNYL3P0C7X3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms