Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
APPP05067 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
APPP05067 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
APPP05067 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 AKR7A2P1-201ENST00000460134 915 ntBASIC17.43■□□□□ 0.38
APPP05067 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 SORD2P-201ENST00000558556 1069 ntBASIC17.43■□□□□ 0.38
APPP05067 SNORD3B-2-202ENST00000571722 791 ntBASIC17.43■□□□□ 0.38
APPP05067 AC103810.3-201ENST00000583567 96 ntBASIC17.43■□□□□ 0.38
APPP05067 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.43■□□□□ 0.38
APPP05067 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.43■□□□□ 0.38
APPP05067 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.43■□□□□ 0.38
APPP05067 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
APPP05067 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
APPP05067 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 AC011498.7-201ENST00000624986 2027 ntBASIC17.43■□□□□ 0.38
APPP05067 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APPP05067 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.43■□□□□ 0.38
APPP05067 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
APPP05067 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.42■□□□□ 0.38
APPP05067 AC005912.2-201ENST00000619492 2400 ntBASIC17.42■□□□□ 0.38
APPP05067 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
APPP05067 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
APPP05067 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
APPP05067 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.42■□□□□ 0.38
APPP05067 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
APPP05067 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
APPP05067 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.42■□□□□ 0.38
APPP05067 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
APPP05067 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
APPP05067 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.42■□□□□ 0.38
APPP05067 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.42■□□□□ 0.38
APPP05067 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.42■□□□□ 0.38
APPP05067 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.42■□□□□ 0.38
APPP05067 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.42■□□□□ 0.38
APPP05067 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.42■□□□□ 0.38
APPP05067 AC133540.1-201ENST00000620845 1019 ntBASIC17.42■□□□□ 0.38
APPP05067 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
APPP05067 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.42■□□□□ 0.38
APPP05067 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.42■□□□□ 0.38
APPP05067 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APPP05067 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
APPP05067 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
APPP05067 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.41■□□□□ 0.38
APPP05067 AC016700.1-201ENST00000429424 312 ntBASIC17.41■□□□□ 0.38
APPP05067 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.41■□□□□ 0.38
APPP05067 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.41■□□□□ 0.38
APPP05067 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.41■□□□□ 0.38
APPP05067 SCARNA20.5-201ENST00000516991 142 ntBASIC17.41■□□□□ 0.38
APPP05067 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.41■□□□□ 0.38
APPP05067 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.41■□□□□ 0.38
APPP05067 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.41■□□□□ 0.38
APPP05067 AC138028.6-201ENST00000616106 1482 ntBASIC17.41■□□□□ 0.38
APPP05067 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.41■□□□□ 0.38
APPP05067 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APPP05067 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms