Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.98□□□□□ -0.33
APOA1P02647 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.98□□□□□ -0.33
APOA1P02647 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.98□□□□□ -0.33
APOA1P02647 AL121723.1-201ENST00000445194 1519 ntBASIC12.98□□□□□ -0.33
APOA1P02647 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOA1P02647 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 AC027369.3-201ENST00000530465 3707 ntBASIC12.97□□□□□ -0.33
APOA1P02647 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 AC125807.2-201ENST00000513358 3514 ntBASIC12.97□□□□□ -0.33
APOA1P02647 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.97□□□□□ -0.33
APOA1P02647 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 FAM210CP-201ENST00000445714 574 ntBASIC12.97□□□□□ -0.33
APOA1P02647 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.97□□□□□ -0.33
APOA1P02647 SPDYE11-202ENST00000450699 704 ntBASIC12.97□□□□□ -0.33
APOA1P02647 UNC93B7-201ENST00000509439 705 ntBASIC12.97□□□□□ -0.33
APOA1P02647 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOA1P02647 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 AC034105.1-201ENST00000563488 319 ntBASIC12.97□□□□□ -0.33
APOA1P02647 SPDYE9P-201ENST00000570642 692 ntBASIC12.97□□□□□ -0.33
APOA1P02647 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.97□□□□□ -0.33
APOA1P02647 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.97□□□□□ -0.33
APOA1P02647 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
APOA1P02647 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 SPDYE10P-202ENST00000612005 668 ntBASIC12.97□□□□□ -0.33
APOA1P02647 SPDYE8P-202ENST00000612377 668 ntBASIC12.97□□□□□ -0.33
APOA1P02647 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 AC009474.1-201ENST00000455096 1565 ntBASIC12.97□□□□□ -0.33
APOA1P02647 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.97□□□□□ -0.33
APOA1P02647 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOA1P02647 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOA1P02647 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.96□□□□□ -0.33
APOA1P02647 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
APOA1P02647 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.96□□□□□ -0.33
APOA1P02647 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.96□□□□□ -0.33
APOA1P02647 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.96□□□□□ -0.33
APOA1P02647 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
APOA1P02647 ADH5P3-201ENST00000433842 1137 ntBASIC12.96□□□□□ -0.33
APOA1P02647 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.96□□□□□ -0.33
APOA1P02647 KRT18P35-201ENST00000510488 1269 ntBASIC12.96□□□□□ -0.33
APOA1P02647 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.96□□□□□ -0.33
APOA1P02647 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.96□□□□□ -0.33
APOA1P02647 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.96□□□□□ -0.33
APOA1P02647 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOA1P02647 FAM95B1-212ENST00000592873 4692 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms