Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CSPG5O95196 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSPG5O95196 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSPG5O95196 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.58■□□□□ 0.09
CSPG5O95196 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSPG5O95196 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 AC006486.2-201ENST00000624246 2199 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 CICP23-201ENST00000605013 2741 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 AC234644.1-201ENST00000406065 370 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.58■□□□□ 0.08
CSPG5O95196 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 DUTP3-201ENST00000450025 415 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 AC010234.1-201ENST00000494599 870 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.58■□□□□ 0.08
CSPG5O95196 GCOM2-201ENST00000509133 1104 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.58■□□□□ 0.08
CSPG5O95196 DNM1P30-201ENST00000563586 452 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.58■□□□□ 0.08
CSPG5O95196 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.58■□□□□ 0.08
CSPG5O95196 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 AC025262.2-201ENST00000623975 1056 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CSPG5O95196 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.58■□□□□ 0.08
CSPG5O95196 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.58■□□□□ 0.08
CSPG5O95196 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.58■□□□□ 0.08
CSPG5O95196 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSPG5O95196 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.57■□□□□ 0.08
CSPG5O95196 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.57■□□□□ 0.08
CSPG5O95196 DUX4L50-201ENST00000455245 715 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 RN7SL277P-201ENST00000481521 288 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.57■□□□□ 0.08
CSPG5O95196 NUDT4P2-201ENST00000578341 546 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 AC006158.1-201ENST00000610661 249 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 MIR6756-201ENST00000616240 63 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.57■□□□□ 0.08
CSPG5O95196 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
CSPG5O95196 AC023908.3-201ENST00000564211 3047 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 CICP24-201ENST00000605464 2705 ntBASIC15.57■□□□□ 0.08
CSPG5O95196 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms