Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 USP17L6P-201ENST00000382470 1197 ntBASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 AL118558.3-201ENST00000607414 1079 ntBASIC13.75□□□□□ -0.21
LRIT2A6NDA9 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LRIT2A6NDA9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 MST1P2-201ENST00000457982 2291 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 FAM86MP-201ENST00000340703 885 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC078875.1-201ENST00000431907 724 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC044849.1-201ENST00000519737 1188 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC009779.1-201ENST00000551138 283 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC140658.4-201ENST00000561990 352 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AL132994.2-201ENST00000603120 687 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AL022328.3-201ENST00000607943 679 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC092299.1-201ENST00000632679 757 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 KRT8P24-201ENST00000560290 1559 ntBASIC13.74□□□□□ -0.21
LRIT2A6NDA9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.74□□□□□ -0.21
LRIT2A6NDA9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms