Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC005586.2-201ENST00000563946 837 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AL390955.2-201ENST00000603032 514 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 MIR8072-201ENST00000614241 80 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AL136317.3-201ENST00000618497 906 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 GHET1-201ENST00000627071 1906 ntBASIC12.62□□□□□ -0.39
SHISA3A0PJX4 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 C1QBPP1-201ENST00000400117 770 ntBASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC134915.1-201ENST00000426461 574 ntBASIC12.62□□□□□ -0.39
SHISA3A0PJX4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 MESTP3-201ENST00000503460 968 ntBASIC12.62□□□□□ -0.39
SHISA3A0PJX4 ALG3P1-201ENST00000508806 1114 ntBASIC12.62□□□□□ -0.39
SHISA3A0PJX4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SHISA3A0PJX4 PI4KAP2-201ENST00000360806 2080 ntBASIC12.61□□□□□ -0.39
SHISA3A0PJX4 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA3A0PJX4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 693.7 ms