Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 GULOP-201ENST00000454030 748 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 RN7SL128P-201ENST00000467883 305 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 AC092862.1-201ENST00000541534 533 ntBASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC20.88■□□□□ 0.93
SHANK2Q9UPX8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 AC144831.1-201ENST00000573312 2656 ntBASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 MIR8071-1-201ENST00000616769 65 ntBASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 MIR8071-2-201ENST00000616772 65 ntBASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHANK2Q9UPX8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 AC089987.1-201ENST00000551654 2209 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ZNF877P-201ENST00000437614 612 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 TYMSP2-201ENST00000589501 424 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 AC073869.4-201ENST00000620841 800 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 SALL4P6-201ENST00000429385 1691 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 HSPA7-201ENST00000445535 1927 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 FKBP4P8-201ENST00000610931 1369 ntBASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHANK2Q9UPX8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 TCAM1P-207ENST00000485295 1537 ntBASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC106827.1-201ENST00000366454 431 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms