Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 RN7SL767P-201ENST00000493013 295 ntBASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC005586.2-201ENST00000563946 837 ntBASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC006158.1-201ENST00000610661 249 ntBASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC011471.3-201ENST00000623576 402 ntBASIC16.59■□□□□ 0.25
PNMA3Q9UL41 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AC021305.1-201ENST00000520656 1514 ntBASIC16.59■□□□□ 0.25
PNMA3Q9UL41 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PNMA3Q9UL41 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
PNMA3Q9UL41 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC234644.1-201ENST00000406065 370 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 SCARNA12-201ENST00000459155 270 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC226150.1-201ENST00000544259 466 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 CTBP2P8-201ENST00000422584 1330 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A21P-201ENST00000510875 1396 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A15P-201ENST00000514465 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A6P-201ENST00000515148 1394 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A16P-201ENST00000526662 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A9P-201ENST00000527940 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A5P-201ENST00000528738 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A14P-201ENST00000530386 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 FAM90A13P-201ENST00000534703 1395 ntBASIC16.58■□□□□ 0.24
PNMA3Q9UL41 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PNMA3Q9UL41 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms