Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC52A1Q9NWF4 AC090505.1-201ENST00000430515 1834 ntBASIC20.23■□□□□ 0.83
SLC52A1Q9NWF4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 RN7SL832P-201ENST00000607781 1756 ntBASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 AC092896.1-201ENST00000465850 380 ntBASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 GARS-210ENST00000627489 324 ntTSL 4 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 AC015909.5-201ENST00000624336 2266 ntBASIC20.22■□□□□ 0.83
SLC52A1Q9NWF4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 UROS-201ENST00000368774 744 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 SERBP1P2-201ENST00000436888 1164 ntBASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 CASP16P-204ENST00000635032 809 ntBASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 SALL4P6-201ENST00000429385 1691 ntBASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 AL139158.3-201ENST00000641212 1562 ntBASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC52A1Q9NWF4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SLC52A1Q9NWF4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 RNLS-203ENST00000437752 525 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AC113385.2-201ENST00000614465 762 ntBASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 MTHFR-210ENST00000641407 2387 ntBASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC52A1Q9NWF4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms