Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AC243964.3-201ENST00000623022 2028 ntBASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ZPLD1-204ENST00000491959 2189 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 HLA-V-203ENST00000457107 4814 ntBASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TUBB8P4-201ENST00000511806 1324 ntBASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CDKL1-201ENST00000216378 2209 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CEACAM19-201ENST00000358777 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 PSMD10-201ENST00000217958 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDC42SE1Q9NRR8 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AL590483.3-201ENST00000623669 3580 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TIMMDC1-208ENST00000494664 2394 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AC092447.8-201ENST00000566570 4162 ntBASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC7.16□□□□□ -1.26
CDC42SE1Q9NRR8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms