Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 RN7SL219P-201ENST00000582872 296 ntBASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 MIR4259-201ENST00000584466 101 ntBASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AP001002.2-201ENST00000625137 386 ntBASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AC010327.5-201ENST00000586923 3061 ntBASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 AC090643.2-201ENST00000623442 2029 ntBASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NEUROD4Q9HD90 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AL161932.2-201ENST00000435436 679 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 TMEM198B-204ENST00000484016 896 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC078819.1-201ENST00000547454 765 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC012085.1-201ENST00000548270 765 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 ACTG1P22-201ENST00000603793 1099 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC073413.1-201ENST00000603927 732 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AC104506.1-201ENST00000609247 429 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 MIR6775-201ENST00000617557 69 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 CICP16-201ENST00000502609 2813 ntBASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.75□□□□□ -0.21
NEUROD4Q9HD90 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC092053.3-201ENST00000641308 4975 ntBASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC010141.1-201ENST00000411585 623 ntBASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms