Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AC004554.1-201ENST00000422830 1468 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 PTGER4P2-201ENST00000328411 252 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AL512599.1-201ENST00000430724 685 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 KRT18P15-201ENST00000458108 1291 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 PTGER4P3-201ENST00000458150 252 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AL160191.2-201ENST00000603975 601 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AL139339.2-201ENST00000608063 657 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AL031673.1-201ENST00000611460 466 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 AP000769.1-203ENST00000637245 208 ntBASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH11XQ9BZA7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 HLA-DPA2-205ENST00000433582 733 ntBASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ASS1P2-201ENST00000439895 1223 ntBASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC083801.1-201ENST00000491689 358 ntBASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH11XQ9BZA7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AC068587.6-202ENST00000641839 5619 ntBASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms