Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CMSS1Q9BQ75 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 AC011498.7-201ENST00000624986 2027 ntBASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.49□□□□□ -0.41
CMSS1Q9BQ75 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CMSS1Q9BQ75 SOCS2P1-201ENST00000417727 557 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms