Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 INE1-201ENST00000456273 945 ntBASIC12.48□□□□□ -0.41
GFI1Q99684 AC011495.1-201ENST00000498085 584 ntBASIC12.48□□□□□ -0.41
GFI1Q99684 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.48□□□□□ -0.41
GFI1Q99684 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
GFI1Q99684 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.48□□□□□ -0.41
GFI1Q99684 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.48□□□□□ -0.41
GFI1Q99684 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 AC108024.1-201ENST00000626286 1721 ntBASIC12.48□□□□□ -0.41
GFI1Q99684 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GFI1Q99684 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GFI1Q99684 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.47□□□□□ -0.41
GFI1Q99684 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.47□□□□□ -0.41
GFI1Q99684 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.47□□□□□ -0.41
GFI1Q99684 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.47□□□□□ -0.41
GFI1Q99684 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 PCDHB19P-202ENST00000625133 2914 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 AL122018.1-201ENST00000446607 2310 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.47□□□□□ -0.41
GFI1Q99684 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.47□□□□□ -0.41
GFI1Q99684 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.47□□□□□ -0.41
GFI1Q99684 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 AP003171.2-201ENST00000528208 925 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 AC106820.3-201ENST00000561653 397 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.47□□□□□ -0.41
GFI1Q99684 TMEM261P1-201ENST00000604899 340 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 AC145423.3-201ENST00000615987 467 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFI1Q99684 AL139385.1-201ENST00000611744 3272 ntBASIC12.47□□□□□ -0.41
GFI1Q99684 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms